BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D06SP1|AL426205
(765 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1222 1492 0.0
>3x_Contig1222
Length = 5224
Score = 1492 bits (750), Expect = 0.0
Identities = 761/766 (99%), Gaps = 1/766 (0%)
Strand = Plus / Plus
Query: 1 gatccatcaacaagatcc-tttcagtgttactattgtaactgacgagagttaaatggtcg 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2944 gatccatcaacaagatccctttcagtgttactattgtaactgacgagagttaaatggtcg 3003
Query: 60 catggtggtaatacaactctctttcctggtggcacttggaatttttcaatcgttttaagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 catggtggtaatacaactctctttcctggtggcacttggaatttttcaatcgttttaagc 3063
Query: 120 aggggacagtattgtagatyatcgactattgtagtgttatcctcacattgcaattgattc 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 aggggacagtattgtagatcatcgactattgtagtgttatcctcacattgcaattgattc 3123
Query: 180 actgtcataatcctaggtgcaatcactttcttaccccttcttatgttcaaagtgaacagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 actgtcataatcctaggtgcaatcactttcttaccccttcttatgttcaaagtgaacagc 3183
Query: 240 gtttccacgtcatgtaaatdagtagtctcaaatatcgtgtcgatatcaaacatgtcaact 299
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3184 gtttccacgtcatgtaaataagtagtctcaaatatcgtgtcgatatcaaacatgtcaact 3243
Query: 300 tcctggtgattaatatctcggttggcgaatatatgtdattcacataatcgtagttggctt 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3244 tcctggtgattaatatctcggttggcgaatatatgtaattcacataatcgtagttggctt 3303
Query: 360 tgacaatggcttagctctctgaaatagaacttggaaaggaaattggtagtcgtcttatac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3304 tgacaatggcttagctctctgaaatagaacttggaaaggaaattggtagtcgtcttatac 3363
Query: 420 atgaagcatagattctttagagtacccatcccacttagccctctacttaattcacataat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3364 atgaagcatagattctttagagtacccatcccacttagccctctacttaattcacataat 3423
Query: 480 gccgtcgccaatgggtcactgtagcagcgatcggatacgatgacaatgagaacgttgtca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3424 gccgtcgccaatgggtcactgtagcagcgatcggatacgatgacaatgagaacgttgtca 3483
Query: 540 aacttccgtagaaattcgctcaacacaggaaacttgaacgtatctgtatttacgcaagcg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 aacttccgtagaaattcgctcaacacaggaaacttgaacgtatctgtatttacgcaagcg 3543
Query: 600 gtgtttctctcatcagataacaactcataattgcdaggatctgctaaggtttttgatgat 659
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3544 gtgtttctctcatcagataacaactcataattgcaaggatctgctaaggtttttgatgat 3603
Query: 660 tccctatccaaatcccaaatcttcaatacaccaagcttgcgctttataattgttctaaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3604 tccctatccaaatcccaaatcttcaatacaccaagcttgcgctttataattgttctaaaa 3663
Query: 720 tgtgaaccaaccttactccatgctaacagactctctagactgtcta 765
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 tgtgaaccaaccttactccatgctaacagactctctagactgtcta 3709
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4569
Number of Sequences: 1807
Number of extensions: 4569
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 765
length of database: 10,358,551
effective HSP length: 16
effective length of query: 749
effective length of database: 10,329,639
effective search space: 7736899611
effective search space used: 7736899611
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)